CDS

Accession Number TCMCG017C30014
gbkey CDS
Protein Id OMO63175.1
Location complement(join(20323..20687,20796..20891,22015..22090,22183..22383,22632..22640))
GeneID InterPro:IPR003604
Organism Corchorus olitorius
locus_tag COLO4_32686

Protein

Length 248aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01021143.1
Definition Zinc finger, U1-type [Corchorus olitorius]
Locus_tag COLO4_32686

EGGNOG-MAPPER Annotation

COG_category A
Description RNA-binding protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13220        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003725        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005684        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006304        [VIEW IN EMBL-EBI]
GO:0006305        [VIEW IN EMBL-EBI]
GO:0006306        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009845        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0015030        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044728        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071005        [VIEW IN EMBL-EBI]
GO:0071011        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080188        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090351        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACTGAGTATTGGGTAAGTCAGGGGAATAAATGGTGTGATTACTGCAAAATCTACATAGCCAATAATCCATCAAGTATTCGGAACCATGAGCTTGGTCAACGGCATAAAGAGAGTGTTGCTAAGAGGCTTGACACTATGCGAAAAGAAAGCACAGCCAAAGAGAAGGAGAAGAAGGAAGCAGCCCGTGCTCTTGAACAGATTGAAGCTAAAGCTAAGCGGAGTTATCAGAAGGATGTTGCCAGTTTTGAAGCAAGAGATGCTCAAGAACTAGATGACCAAGAAGACTGGGAGTATGACAGCAGTTCAGGTTATTACTACAATCAGAGCAATGGTTTATACTATGATTCAAAGTCAGGCTTTTACTATTCTGATGCTATAGGCAGATGGGTGACACAGGAAGAGGCTTACTCCTCAGCTCAAGCTTCATCAAGTTCTAAAGCAAAAGGCCCTATTTTGAAAAAGCCACTTCCAACTTCAGCGGTCGGAGCAGTTGCAAATAGCAAAAGTGCTGCTAAAAGCCAAAGTGCAGCCGCACCTGGACCTGTTGTTTCAGGTTCTTTAAATCCCACGAGATCTGTTAAAGGTGCTCAATCATCACTTGCTGTTAAGAGAAAAAGGCAGGATGAAAAGCCCAAGGCTGTATCAAAAGAAGAGGCAGCTGCACTCAAAGCAAGGGAAGCTGCAAGGAAGAGAGTTGAAGAGAGAGAGAAACCATTGCTTGGCCTGTACAATGGATCTCGCTGA
Protein:  
MTEYWVSQGNKWCDYCKIYIANNPSSIRNHELGQRHKESVAKRLDTMRKESTAKEKEKKEAARALEQIEAKAKRSYQKDVASFEARDAQELDDQEDWEYDSSSGYYYNQSNGLYYDSKSGFYYSDAIGRWVTQEEAYSSAQASSSSKAKGPILKKPLPTSAVGAVANSKSAAKSQSAAAPGPVVSGSLNPTRSVKGAQSSLAVKRKRQDEKPKAVSKEEAAALKAREAARKRVEEREKPLLGLYNGSR